AKAO 2017 Annual Report

144 Incorporated by Reference from Provided Herewith Exhibit Number Description of Document Registrant's Form File No. Date Filed with the SEC Exhibit Number 10.4(D) First Amendment, dated April 1, 2013, to that certain Amended and Restated Lease Agreement, dated December 29, 2010, by and between the registrant and ARE- San Francisco No. 17, LLC. S-1 333-193559 1/24/2014 10.9(D) 10.4(E) Second Amendment, dated June 28, 2013, to that certain Amended and Restated Lease Agreement, dated as of December 29, 2010, by and between the registrant and ARE-San Francisco No. 17, LLC. S-1 333-193559 1/24/2014 10.9(E) 10.5(A) Lease dated August 12, 2016, by and between AP3-SF2 CT South, LLC and Achaogen, Inc. 10-Q 001-36323 11/7/2016 10.2 10.5(B) First Amendment to Lease, dated April 7, 2017, by and between AP3-SF2 CT South, LLC and Achaogen, Inc. 10-Q 001-36323 8/8/2017 10.3 10.5(C) Second Amendment to Lease, effective as of July 20, 2017, by and between AP3-SF2 CT South, LLC and Achaogen, Inc. 10-Q 001-36323 11/8/2017 10.2 10.5(D) Third Amendment to Lease, effective August 17, 2017, by and between AP3- SF2 CT South, LLC and Achaogen, Inc. 10-Q 001-36323 11/8/2017 10.3 10.6(A)# Achaogen, Inc. Amended and Restated 2003 Stock Plan, as amended. S-8 333-195348 4/17/2014 99.1 10.6(B)# Amendment to Amended and Restated 2003 Stock Plan, as amended. 10-K 001-36323 3/16/2015 10.8(B) 10.6(C)# Form of Stock Option Agreement under Achaogen, Inc. Amended and Restated 2003 Stock Plan. S-1 333-193559 1/24/2014 10.1(B) 10.7(A)# Achaogen, Inc. 2014 Equity Incentive Award Plan. S-8 333-195348 4/17/2014 99.3 10.7(B)# Form of Stock Option Agreement under Achaogen, Inc. 2014 Equity Incentive Award Plan. S-1/A 333-193559 2/12/2014 10.2(B) 10.7(C)# Form of Restricted Stock Agreement under Achaogen, Inc. 2014 Equity Incentive Award Plan. S-1/A 333-193559 2/12/2014 10.2(C) 10.7(D)# Form of Restricted Stock Unit Award Grant Notice and Restricted Stock Unit Award Agreement under Achaogen, Inc. 2014 Equity Incentive Award Plan. 10-K 001-36323 3/15/2016 10.18(D) 10.8# Achaogen, Inc. 2014 Employee Stock Purchase Plan. S-8 333-195348 4/17/2014 99.7 10.9(A)# Achaogen, Inc. 2014 Employment Commencement Incentive Plan. 10-Q 001-36323 11/8/2017 10.1